Tehdyt toimenpiteet
get_tag_array
get_tag_array
This function parses the tag databases and returns a Tcl list containing the tag information. Each element of the returned list consist of the tag name, its type, and the default comment.
For instance, the standard installation returns a list starting with
"{comment COMM ?} {oligo OLIG {}} {compression COMP {}} {stop
STOP {}}".
Main Commands
- assemble_direct
- assemble... commands
- break_contig
- calc_quality
- check_assembly
- check_database
- complement_contig
- delete_contig
- disassemble_readings
- double_strand
- edit_contig
- enter_tags
- extract_readings
- find_long_gels
- find_oligo
- find_primers
- find_probes
- find_read_pairs
- find_repeats
- find_taq_terminator
- find_internal_joins
- get_consensus
- join_contig
- minimal_coverage
- pre_assemble
- shift_readings
- show_relationships
- unattached_readings
This page is maintained by staden-package. Last generated on 25 April 2003.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/scripting_67.html