




disassemble_readings
disassemble_readings
-io io_handle:integer
-readings identifiers:strings
?-all for_all:integer(1)?
?-remove to_remove:integer(1)?
This command disassembles readings by either removing them from the database or moving them to their own contigs. The function returns no value but will generate a Tcl error if an error occurs.
-io
io_handle-
The database IO handle returned from a previous
open_db
call. -readings
identifiers-
Specifies the list of readings to disassemble.
-all
for_all-
Controls whether to disassemble all readings or only those that are not
"crucial" (those that would cause a contig to break into fragments). A
non-zero value will disassemble all. The default is 1.
-remove
to_remove- Controls whether to completely remove the readings from the database or to move them to their own contigs. A non-zero value will remove them, otherwise they are moved. The default is 1.





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URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/scripting_76.html