CSC

edit_contig

edit_contig
 -io            io_handle:integer
 -contig        identifier:string
?-reading       identifier:string()?
?-pos           position:integer(1)?

This command brings up a contig editor display. The function returns no value but will generate a Tcl error if an error occurs.

-io io_handle

The database IO handle returned from a previous open_db call.

-contig identifier

This specifies the contig to edit.

-reading identifier

-pos position

By default the editor starts with the display and cursor at the left end of the consensus. Use these options to specify a different reading and position. The position is relative to the start of the specified reading. To start the editor at a specific position in the consensus sequence use only -pos.