CSC

	Tehdyt toimenpiteet Application Groups   Group Description Acd Acd file utilities Alignment Sequence comparison and alignment Alignment consensus Merging sequences to make a consensus Alignment differences Finding differences between sequences Alignment dot plots Dot plot sequence comparisons Alignment global Global sequence alignment Alignment local Local sequence alignment Alignment multiple Multiple sequence alignment Assembly fragment assembly DNA sequence assembly Data resources Data resources Data retrieval Data retrieval Data retrieval chemistry data Chemistry data retrieval Data retrieval feature data Sequence feature data retrieval Data retrieval ontology data Ontology data retrieval Data retrieval resource data Resource data retrieval Data retrieval sequence data Sequence data retrieval Data retrieval text data Text data retrieval Data retrieval tool data Tool data retrieval Data retrieval url data Url data retrieval Display Publication-quality display Documentation Documentation Edit Sequence editing Enzyme kinetics Enzyme kinetics calculations Feature tables Manipulation and display of sequence annotation HMM Hidden markov model analysis Menus Menu interface(s) Nucleic 2d structure Nucleic acid secondary structure Nucleic codon usage Codon usage analysis Nucleic composition Composition of nucleotide sequences Nucleic CpG islands CpG island detection and analysis Nucleic functional sites Nucleic acid functional sites Nucleic gene finding Predictions of genes and other genomic features Nucleic motifs Nucleic acid motif searches Nucleic mutation Nucleic acid sequence mutation Nucleic primers Primer prediction Nucleic profiles Nucleic acid profile generation and searching Nucleic properties Nucleic acid physicochemical properties Nucleic repeats Nucleic acid repeat detection Nucleic restriction Restriction enzyme sites in nucleotide sequences Nucleic RNA folding RNA folding methods and analysis Nucleic transcription Transcription factors, promoters and terminator prediction Nucleic translation Translation of nucleotide sequence to protein sequence Ontology Ontologies Ontology edam Edam ontology Ontology go Go gene ontology Ontology taxonomy Ncbi taxonomy Phylogeny consensus Phylogenetic consensus methods Phylogeny continuous characters Phylogenetic continuous character methods Phylogeny discrete characters Phylogenetic discrete character methods Phylogeny distance matrix Phylogenetic distance matrix methods Phylogeny gene frequencies Phylogenetic gene frequency methods Phylogeny molecular sequence Phylogenetic molecular sequence methods Phylogeny tree drawing Phylogenetic tree drawing methods Protein 2d structure Protein secondary structure Protein 3d structure Protein tertiary structure Protein composition Composition of protein sequences Protein domains Protein domain analysis Protein functional sites Protein functional sites Protein modifications Protein post-translational modifications Protein motifs Protein motif searches Protein mutation Protein sequence mutation Protein profiles Protein profile generation and searching Protein properties Protein physicochemical properties Test Testing tools, not for general use. Utils Utility tools Utils database creation Database installation Utils database indexing Database indexing