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Pregap4 - Pregap4-ManualConfig-Phrap Assembly first previous next last contents

Phrap Assembly

Filename
phrap_assemble.p4m

Local variables
minmatch
integer
minscore
integer
other_args
string

Files
fofn.tmp -- temporary

fofn.assembly/fofn

fofn.assembly/phrap_stdout

fofn.assembly/phrap_stderr

fofn.contigs

fofn.contigs.qual

fofn.singlets

fofn.phrap_log

Errors
phrap: singlet

phrap: failed

Report
SEQ seqid: assembled

SEQ seqid: singlet

SEQ seqid: failed

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This page is maintained by staden-package. Last generated on 25 April 2003.
URL: http://www.mrc-lmb.cam.ac.uk/pubseq/manual/pregap4_unix_90.html