CSC

Sequencing Vector Clip

Filename

sequence_vector_clip.p4m

Local variables

min_5_match

float

min_3_match

float

def_5_pos

integer

update_exp_file

0/1

use_vp_file

0/1

vp_file

filename

vector_list

string

vp_length

integer

Global variables

SP

SP_com

SC

SC_com

SF

SF_com

Files

fofn.tmp -- temporary

fofn.svec_passed

fofn.svec_failed

Errors

sequence_vector_clip: No SF, SC or SP information

sequence_vector_clip: vector_clip error message

sequence_vector_clip: lost file

Report

SEQ seqid: passed

SEQ seqid: failed (reason)

SEQ seqid: lost